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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015888410.1_cds_XP_016442979.1_38188
CDS Infomation

[gene=LOC107768371] [db_xref=GeneID:107768371] [protein=caffeoylshikimate esterase-like] [protein_id=XP_016442979.1] [location=complement(join(88700..88918,89012..89110,89387..89524,90815..90945,91116..91262,91374..91503,92514..92543,93064..93351))] [gbkey=CDS]
Sequence

ATGGACCTTACTCTAACTTCCACTTTCCGACCATCTTTACCACCTGAATTCTCATTCATT
CACCGGAAAATTAACCAACCCATTATTCTCCATCATAATTTGAAGTGTAAACCATTAATT
TCAAAGAATAAAGTGATTACTATGGCAATTAAAAAGCCAAAAATTGAAGGTGTAAGTGAA
GCATTAAATGAAATTGCTTCACAGAATTTGGATCATGCTCCTGCTAGAAGAAGGGTTCGA
TCAGCTTTTATTGCTACTCAGCAACAGCTTGATCATATCTTATTTAAGATGGCTCCAGCT
GATATCAGAGTAGAAGAGTGGTATGAAACAAATTCGAAAGGCCAACAGATTTTCTGTAAA
AGTTGGCTGCCAAAGCCAGGCGTACGAATTAAAGGTGCTTTGTGCTTTTGTCATGGATAT
GGTGATACCTGCACTTTCTTCTTTGAAGGTATTGCAAGGTTTATTTCGGCCTCTGGCTAT
GCAGTCTATGCGATTGACCATCCCGGTTTTGGTCTCTCGGATGGTTTGCACGGATATATT
CCTGAATTTGATGGTATAGTTGACAATGTCAATGAGCAGTATGTGAAGATAAAAGGTAGG
CCAGAAGTTAGCGGGCTTCCCTGCTTTATATTTGGGCAATCAATGGGAGGTGCAATTGCT
CTGAAAGCTCTTCTAAAGGAACCACGTCAATGGGATGGAGTTGTCCTTGTTGCGCCAATG
TGCAAAATTGCAGAAGACATGACGCCACCAGTTCTCCTACAGAAAGTCTTGATTTTTGTA
TCAAACGTTACGCCACAAGCAAAGATAGTCCCTACTAAAGATTTGGCAGAATTGGCATTC
AGGGAGTTCAAGAAAAGGAAAATGGCTCCATACAATGTAATCTCTTACTCGCATAAAACA
CGCGTGAAAACTGCTGTTGAACTCTTAAACGCTACAAAATACATAGAATCGCAGGTGGAA
AAGGTGGCATCCCCGATGCTCATTCTTCACGGAGCTGCAGATAAAGTGACGGATCCTCTC
GTTAGTCAGTATCTGTATGATAAGTCTTCGAGCAGCGACAAAACTCTTAAGCTCTATGAA
GGAGGCTATCACTGCATTCTTGAAGGTGAACCTGATGACAGGATTCTTACTGTGCTCAAT
GACATTATCTCGTGGCTTGATTCTCGTTGCTCCGCAAATTAG

Peptide Sequence

PEP ID

XP_016442979.1
PEP Infomation

PREDICTED: caffeoylshikimate esterase-like [Nicotiana tabacum]
Sequence

MDLTLTSTFRPSLPPEFSFIHRKINQPIILHHNLKCKPLISKNKVITMAIKKPKIEGVSE
ALNEIASQNLDHAPARRRVRSAFIATQQQLDHILFKMAPADIRVEEWYETNSKGQQIFCK
SWLPKPGVRIKGALCFCHGYGDTCTFFFEGIARFISASGYAVYAIDHPGFGLSDGLHGYI
PEFDGIVDNVNEQYVKIKGRPEVSGLPCFIFGQSMGGAIALKALLKEPRQWDGVVLVAPM
CKIAEDMTPPVLLQKVLIFVSNVTPQAKIVPTKDLAELAFREFKKRKMAPYNVISYSHKT
RVKTAVELLNATKYIESQVEKVASPMLILHGAADKVTDPLVSQYLYDKSSSSDKTLKLYE
GGYHCILEGEPDDRILTVLNDIISWLDSRCSAN

Transcript Sequence

Gene sequence data has not been registered.